home/categories/scientific-computing/pharmolix-openbiomed-skills-single-cell-foundation-model-scrna-seq-geneformer-skill-md
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single-cell-foundation-model-geneformer

Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.

PharMolix
maintainer
PharMolix
更新日 3/16/2026
スター
1036
フォーク
120
quick start

Installation and usage

Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.

インストール
$ install --globalskills.sh
使い方

インストール後、ターミナルで以下のコマンドを実行してこのスキルを使用できます:

skills use single-cell-foundation-model-geneformer