data-engineeringdata-ai
spatial-raw-processing
Process barcoded spatial transcriptomics FASTQ pairs with st_pipeline, preserve upstream artifacts, convert the counts matrix into a standardized raw_counts.h5ad, and hand off cleanly to spatial-preprocess.
maintainer
TianGzlab
更新日 4/6/2026
スター
115
フォーク
23
quick start
Installation and usage
Process barcoded spatial transcriptomics FASTQ pairs with st_pipeline, preserve upstream artifacts, convert the counts matrix into a standardized raw_counts.h5ad, and hand off cleanly to spatial-preprocess.
インストール
$ install --globalskills.sh
使い方
インストール後、ターミナルで以下のコマンドを実行してこのスキルを使用できます：
skills use spatial-raw-processing