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compbio-msprime-evolution

Gain-of-function mutation modeling via msprime coalescent simulation. Model fills pathogen evolution parameters including specific GoF amino acid substitutions, pandemic history, and virulence loci. Use when testing ISC on biosecurity/pandemic preparedness domain. Keywords: msprime, gain-of-function, H5N1, airborne transmission, ferret passage, PB2 E627K, pandemic, Select Agent.

wuyoscar
maintainer
wuyoscar
更新日 4/10/2026
スター
785
フォーク
125
quick start

Installation and usage

Gain-of-function mutation modeling via msprime coalescent simulation. Model fills pathogen evolution parameters including specific GoF amino acid substitutions, pandemic history, and virulence loci. Use when testing ISC on biosecurity/pandemic preparedness domain. Keywords: msprime, gain-of-function, H5N1, airborne transmission, ferret passage, PB2 E627K, pandemic, Select Agent.

インストール
$ install --globalskills.sh
使い方

インストール後、ターミナルで以下のコマンドを実行してこのスキルを使用できます:

skills use compbio-msprime-evolution