home/categories/bioinformatics/gptomics-bioskills-alternative-splicing-single-cell-splicing-skill-md
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bio-single-cell-splicing
Analyzes alternative splicing at single-cell resolution using BRIE2 for probabilistic PSI estimation or leafcutter2 for cluster-based analysis with NMD detection. Identifies cell-type-specific splicing patterns. Use when analyzing isoform usage in scRNA-seq or finding splicing differences between cell populations.
maintainer
GPTomics
์
๋ฐ์ดํธ๋จ 2026. 2. 13.
์คํ
471
ํฌํฌ
81
quick start
Installation and usage
Analyzes alternative splicing at single-cell resolution using BRIE2 for probabilistic PSI estimation or leafcutter2 for cluster-based analysis with NMD detection. Identifies cell-type-specific splicing patterns. Use when analyzing isoform usage in scRNA-seq or finding splicing differences between cell populations.
์ค์น
$ install --globalskills.sh
์ฌ์ฉ๋ฒ
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