home/categories/scientific-computing/gptomics-bioskills-genome-assembly-contamination-detection-skill-md
scientific-computingresearch
bio-genome-assembly-contamination-detection
Detect contamination and assess genome quality using CheckM, CheckM2, GTDB-Tk, and GUNC for metagenome-assembled genomes and isolate assemblies. Use when checking assemblies for contamination.
maintainer
GPTomics
업데이트됨 2/13/2026
스타
471
포크
81
quick start
Installation and usage
Detect contamination and assess genome quality using CheckM, CheckM2, GTDB-Tk, and GUNC for metagenome-assembled genomes and isolate assemblies. Use when checking assemblies for contamination.
설치
$ install --globalskills.sh
사용법
설치 후 터미널에서 다음 명령을 실행하여 이 스킬을 사용할 수 있습니다:
skills use bio-genome-assembly-contamination-detection