home/categories/lab-tools/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-ngs-qc-read-qc-contamination-screening-skill-md
lab-toolsresearch
bio-read-qc-contamination-screening
Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample swap contamination. Use when suspecting cross-contamination or working with samples prone to microbial contamination.
maintainer
mdbabumiamssm
์
๋ฐ์ดํธ๋จ 2026. 2. 4.
์คํ
24
ํฌํฌ
4
quick start
Installation and usage
Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample swap contamination. Use when suspecting cross-contamination or working with samples prone to microbial contamination.
์ค์น
$ install --globalskills.sh
์ฌ์ฉ๋ฒ
์ค์น ํ ํฐ๋ฏธ๋์์ ๋ค์ ๋ช ๋ น์ ์คํํ์ฌ ์ด ์คํฌ์ ์ฌ์ฉํ ์ ์์ต๋๋ค:
skills use bio-read-qc-contamination-screening