home/categories/scientific-computing/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-sequence-analysis-alignment-files-alignment-indexing-skill-md

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bio-alignment-indexing

Create and use BAI/CSI indices for BAM/CRAM files using samtools and pysam. Use when enabling random access to alignment files or fetching specific genomic regions.

소스 보기 scientific-computing

maintainer

mdbabumiamssm

업데이트됨 2026. 2. 4.

스타

포크

quick start

Installation and usage

Create and use BAI/CSI indices for BAM/CRAM files using samtools and pysam. Use when enabling random access to alignment files or fetching specific genomic regions.

설치

$ install --globalskills.sh

사용법

설치 후 터미널에서 다음 명령을 실행하여 이 스킬을 사용할 수 있습니다:

skills use bio-alignment-indexing