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scientific-computing
411

clinical-decision-support

Generate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (biomarker-stratified with outcomes) and treatment recommendation reports (evidence-based guidelines with decision algorithms). Supports GRADE evidence grading, statistical analysis (hazard ratios, survival curves, waterfall plots), biomarker integration, and regulatory compliance. Outputs publication-ready LaTeX/PDF format optimized for drug development, clinical research, and evidence synthesis.

K-Dense-AI
K-Dense-AI
research
open
content-creation
411

pptx-posters

Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster format. For standard research posters, use latex-posters instead. This skill provides modern web-based poster design with responsive layouts and easy visual integration.

K-Dense-AI
K-Dense-AI
content-media
open
wellness-health
411

treatment-plans

Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, and pain management. Includes SMART goal frameworks, evidence-based interventions with minimal text citations, regulatory compliance (HIPAA), and professional formatting. Prioritizes brevity and clinical actionability.

K-Dense-AI
K-Dense-AI
lifestyle
open
academic
411

literature-review

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).

K-Dense-AI
K-Dense-AI
research
open
backend
408

drawio-diagram

Generate draw.io network diagrams — native .drawio files with CLI export (PNG/SVG/PDF), plus browser-based Mermaid/XML/CSV via MCP server. Use when creating network topology diagrams, generating architecture visuals, exporting diagrams to PNG or PDF, or building draw.io files from discovery data.

automateyournetwork
automateyournetwork
development
open
mobile
403

swiftui-uikit-interop

Bridges UIKit and SwiftUI by wrapping UIKit views and view controllers in SwiftUI with UIViewRepresentable and UIViewControllerRepresentable, embedding SwiftUI in UIKit with UIHostingController, and coordinating delegate callbacks. Use when integrating camera previews, map views, mail compose, document scanners, PDF renderers, text views with attributed text, or other UIKit-only or third-party UIKit SDK surfaces into a SwiftUI app, or when migrating a UIKit app to SwiftUI incrementally.

dpearson2699
dpearson2699
development
open
academic
397

pdf-text-extractor

Download PDFs (when available) and extract plain text to support full-text evidence, writing `papers/fulltext_index.jsonl` and `papers/fulltext/*.txt`. **Trigger**: PDF download, fulltext, extract text, papers/pdfs, 全文抽取, 下载PDF. **Use when**: `queries.md` 设置 `evidence_mode: fulltext`(或你明确需要全文证据)并希望为 paper notes/claims 提供更强 evidence。 **Skip if**: `evidence_mode: abstract`(默认);或你不希望进行下载/抽取(成本/权限/时间)。 **Network**: fulltext 下载通常需要网络(除非你手工提供 PDF 缓存在 `papers/pdfs/`)。 **Guardrail**: 缓存下载到 `papers/pdfs/`;默认不覆盖已有抽取文本(除非显式要求重抽)。

WILLOSCAR
WILLOSCAR
research
open
cicd
397

research-pipeline-runner

Run this repo’s Units+Checkpoints research pipelines end-to-end (survey/综述/review/调研/教程/系统综述/审稿), with workspaces + checkpoints. **Trigger**: run pipeline, kickoff, 继续执行, 自动跑, 写一篇, survey/综述/review/调研/教程/系统综述/审稿. **Use when**: 用户希望端到端跑流程(创建 `workspaces/<name>/`、生成/执行 `UNITS.csv`、遇到 HUMAN checkpoint 停下等待)。 **Skip if**: 用户明确要手工逐条执行(用 `unit-executor`),或你不应自动推进到 prose 阶段。 **Network**: depends on selected pipeline (arXiv/PDF/citation verification may need network; offline import supported where available). **Guardrail**: 必须尊重 checkpoints(无 Approve 不写 prose);遇到 HUMAN 单元必须停下等待;禁止在 repo root 创建 workspace 工件。

WILLOSCAR
WILLOSCAR
devops
open
academic
397

agent-survey-corpus

Download a small corpus of open-access arXiv survey/review PDFs about LLM agents and extract text for style learning. **Trigger**: agent survey corpus, ref corpus, download surveys, 学习综述写法, 下载 survey. **Use when**: you want to study how real agent surveys structure sections (6–8 H2), size subsections, and write evidence-backed comparisons. **Skip if**: you cannot download PDFs (no network) or you don't want local PDF files. **Network**: required. **Guardrail**: only download arXiv PDFs; store under `ref/` and keep large files out of git.

WILLOSCAR
WILLOSCAR
research
open
academic
397

global-reviewer

Global consistency review for survey drafts: terminology, cross-section coherence, and scope/citation hygiene. Writes `output/GLOBAL_REVIEW.md` and (optionally) applies safe edits to `output/DRAFT.md`. **Trigger**: global review, consistency check, coherence audit, 术语一致性, 全局回看, 章节呼应, 拷打 writer. **Use when**: Draft exists and you want a final evidence-first coherence pass before LaTeX/PDF. **Skip if**: You are still changing the outline/mapping/notes (do those first), or prose writing is not approved. **Network**: none. **Guardrail**: Do not invent facts or citations; do not add new citation keys; treat missing evidence as a failure signal.

WILLOSCAR
WILLOSCAR
research
open
automation-tools
397

latex-compile-qa

Compile a LaTeX project and run basic QA (missing refs, bib errors, broken citations), producing `latex/main.pdf` and a build report. **Trigger**: latex compile, build PDF, LaTeX errors, missing refs, 编译PDF, 引用错误. **Use when**: 已有 `latex/main.tex`(通常来自 `latex-scaffold`),需要确认可编译并输出失败原因报告。 **Skip if**: 还没有 LaTeX scaffold(先跑 `latex-scaffold`)。 **Network**: none. **Guardrail**: 编译失败也要落盘 `output/LATEX_BUILD_REPORT.md`;不做“内容改写”,只做编译/QA。

WILLOSCAR
WILLOSCAR
tools
open
productivity-tools
395

reportlab

PDF generation toolkit. Create invoices, reports, certificates, forms, charts, tables, barcodes, QR codes, Canvas/Platypus APIs, for professional document automation.

jimmc414
jimmc414
tools
open
academic
395

paper-2-web

This skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference posters (Paper2Poster). Use this skill for tasks involving paper dissemination, conference preparation, creating explorable academic homepages, generating video abstracts, or producing print-ready posters from LaTeX or PDF sources.

jimmc414
jimmc414
research
open
academic
395

paper-2-web

This skill should be used when converting academic papers into promotional and presentation formats including interactive websites (Paper2Web), presentation videos (Paper2Video), and conference posters (Paper2Poster). Use this skill for tasks involving paper dissemination, conference preparation, creating explorable academic homepages, generating video abstracts, or producing print-ready posters from LaTeX or PDF sources.

jimmc414
jimmc414
research
open
productivity-tools
395

pdf

PDF manipulation toolkit. Extract text/tables, create PDFs, merge/split, fill forms, for programmatic document processing and analysis.

jimmc414
jimmc414
tools
open
productivity-tools
395

markitdown

Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.

jimmc414
jimmc414
tools
open
productivity-tools
395

pdf

PDF manipulation toolkit. Extract text/tables, create PDFs, merge/split, fill forms, for programmatic document processing and analysis.

jimmc414
jimmc414
tools
open
documents
395

markitdown

Convert various file formats (PDF, Office documents, images, audio, web content, structured data) to Markdown optimized for LLM processing. Use when converting documents to markdown, extracting text from PDFs/Office files, transcribing audio, performing OCR on images, extracting YouTube transcripts, or processing batches of files. Supports 20+ formats including DOCX, XLSX, PPTX, PDF, HTML, EPUB, CSV, JSON, images with OCR, and audio with transcription.

jimmc414
jimmc414
content-media
open
academic
395

literature-review

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).

jimmc414
jimmc414
research
open
academic
395

literature-review

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).

jimmc414
jimmc414
research
open
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