scientific-computingresearch
track-generation
This skill generates normalized BigWig (.bw) tracks (and/or fold-change tracks) from BAM files for ATAC-seq and ChIP-seq visualization. It handles normalization (RPM or fold-change) and Tn5 offset correction automatically. Use this skill when you have filtered and generated the clean BAM file (e.g. `*.filtered.bam`).
maintainer
BIsnake2001
Atualizado 12/12/2025
Estrelas
3
Forks
2
quick start
Installation and usage
This skill generates normalized BigWig (.bw) tracks (and/or fold-change tracks) from BAM files for ATAC-seq and ChIP-seq visualization. It handles normalization (RPM or fold-change) and Tn5 offset correction automatically. Use this skill when you have filtered and generated the clean BAM file (e.g. `*.filtered.bam`).
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use track-generation