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bio-copy-number-gatk-cnv

Call copy number variants using GATK best practices workflow. Supports both somatic (tumor-normal) and germline CNV detection from WGS or WES data. Use when following GATK best practices or integrating CNV calling with other GATK variant pipelines.

Ver código-fontebioinformatics
GPTomics
maintainer
GPTomics
Atualizado 2/13/2026
Estrelas
471
Forks
81
quick start

Installation and usage

Call copy number variants using GATK best practices workflow. Supports both somatic (tumor-normal) and germline CNV detection from WGS or WES data. Use when following GATK best practices or integrating CNV calling with other GATK variant pipelines.

Instalação
$ install --globalskills.sh
Uso

Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:

skills use bio-copy-number-gatk-cnv