home/categories/bioinformatics/gptomics-bioskills-microbiome-differential-abundance-skill-md
bioinformaticsresearch

bio-microbiome-differential-abundance

Differential abundance testing for microbiome data using compositionally-aware methods like ALDEx2, ANCOM-BC2, and MaAsLin2. Use when identifying taxa that differ between experimental groups while accounting for the compositional nature of microbiome data.

GPTomics
maintainer
GPTomics
Atualizado 2/13/2026
Estrelas
471
Forks
81
quick start

Installation and usage

Differential abundance testing for microbiome data using compositionally-aware methods like ALDEx2, ANCOM-BC2, and MaAsLin2. Use when identifying taxa that differ between experimental groups while accounting for the compositional nature of microbiome data.

Instalação
$ install --globalskills.sh
Uso

Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:

skills use bio-microbiome-differential-abundance