home/categories/scripting/gptomics-bioskills-workflow-management-snakemake-workflows-skill-md
scriptingdevelopment

bio-workflow-management-snakemake-workflows

Build reproducible bioinformatics pipelines with Snakemake using rules, wildcards, and automatic dependency resolution. Use when creating Python-based workflows, automating multi-step analyses with make-like dependency tracking, or running pipelines on HPC clusters with SLURM.

GPTomics
maintainer
GPTomics
Atualizado 2/13/2026
Estrelas
471
Forks
81
quick start

Installation and usage

Build reproducible bioinformatics pipelines with Snakemake using rules, wildcards, and automatic dependency resolution. Use when creating Python-based workflows, automating multi-step analyses with make-like dependency tracking, or running pipelines on HPC clusters with SLURM.

Instalação
$ install --globalskills.sh
Uso

Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:

skills use bio-workflow-management-snakemake-workflows