home/categories/astronomy-physics/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-genomics-spatial-transcriptomics-bioskills-spatial-data-io-skill-md
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bio-spatial-transcriptomics-spatial-data-io
Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. Read Space Ranger outputs, convert formats, and access spatial coordinates. Use when loading Visium, Xenium, MERFISH, or other spatial data.
maintainer
mdbabumiamssm
Atualizado 04/02/2026
Estrelas
24
Forks
4
quick start
Installation and usage
Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. Read Space Ranger outputs, convert formats, and access spatial coordinates. Use when loading Visium, Xenium, MERFISH, or other spatial data.
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use bio-spatial-transcriptomics-spatial-data-io