home/categories/astronomy-physics/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-genomics-spatial-transcriptomics-bioskills-spatial-data-io-skill-md
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bio-spatial-transcriptomics-spatial-data-io
Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. Read Space Ranger outputs, convert formats, and access spatial coordinates. Use when loading Visium, Xenium, MERFISH, or other spatial data.
maintainer
mdbabumiamssm
Atualizado 2/4/2026
Estrelas
24
Forks
4
quick start
Installation and usage
Load spatial transcriptomics data from Visium, Xenium, MERFISH, Slide-seq, and other platforms using Squidpy and SpatialData. Read Space Ranger outputs, convert formats, and access spatial coordinates. Use when loading Visium, Xenium, MERFISH, or other spatial data.
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use bio-spatial-transcriptomics-spatial-data-io