home/categories/lab-tools/mdbabumiamssm-llms-universal-life-science-and-clinical-skills-skills-population-genetics-epidemiological-genomics-variant-surveillance-skill-md
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bio-epidemiological-genomics-variant-surveillance
Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
maintainer
mdbabumiamssm
Atualizado 2/4/2026
Estrelas
24
Forks
4
quick start
Installation and usage
Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use bio-epidemiological-genomics-variant-surveillance