home/categories/bioinformatics/mims-harvard-tooluniverse-skills-tooluniverse-cancer-genomics-tcga-skill-md
bioinformaticsresearch

tooluniverse-cancer-genomics-tcga

TCGA/GDC cancer genomics analysis -- cohort construction, clinical metadata retrieval, somatic mutation profiling, copy number variation analysis, survival analysis, and clinical variant interpretation. Use when users ask about TCGA data, GDC cancer cohorts, somatic mutation frequencies, Kaplan-Meier survival, CNV profiles in cancer, or OncoKB interpretation of cancer variants.

mims-harvard
maintainer
mims-harvard
Atualizado 3/29/2026
Estrelas
1240
Forks
191
quick start

Installation and usage

TCGA/GDC cancer genomics analysis -- cohort construction, clinical metadata retrieval, somatic mutation profiling, copy number variation analysis, survival analysis, and clinical variant interpretation. Use when users ask about TCGA data, GDC cancer cohorts, somatic mutation frequencies, Kaplan-Meier survival, CNV profiles in cancer, or OncoKB interpretation of cancer variants.

Instalação
$ install --globalskills.sh
Uso

Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:

skills use tooluniverse-cancer-genomics-tcga