home/categories/bioinformatics/pharmolix-openbiomed-skills-single-cell-scrna-seq-analysis-scanpy-skill-md
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single-cell-scrna-seq-analysis-scanpy
Complete single-cell RNA-seq analysis workflow built on Scanpy and AnnData. Use this skill when: (1) Loading diverse single-cell data formats (10X, h5ad, CSV), (2) Performing quality control and filtering, (3) Normalization, dimensionality reduction, and clustering, (4) Marker gene identification and cell type annotation.
maintainer
PharMolix
Atualizado 16/03/2026
Estrelas
1036
Forks
120
quick start
Installation and usage
Complete single-cell RNA-seq analysis workflow built on Scanpy and AnnData. Use this skill when: (1) Loading diverse single-cell data formats (10X, h5ad, CSV), (2) Performing quality control and filtering, (3) Normalization, dimensionality reduction, and clustering, (4) Marker gene identification and cell type annotation.
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use single-cell-scrna-seq-analysis-scanpy