home/categories/bioinformatics/runchuan-bu-bioclaw-container-skills-scrna-preprocessing-clustering-skill-md
bioinformaticsresearch
scrna-preprocessing-clustering
Standard scRNA-seq preprocessing and clustering with Scanpy. Use for QC, normalization, HVG selection, PCA, neighbor graph construction, UMAP, Leiden clustering, and export of an analysis-ready AnnData object.
maintainer
Runchuan-BU
Atualizado 3/22/2026
Estrelas
325
Forks
41
quick start
Installation and usage
Standard scRNA-seq preprocessing and clustering with Scanpy. Use for QC, normalization, HVG selection, PCA, neighbor graph construction, UMAP, Leiden clustering, and export of an analysis-ready AnnData object.
Instalação
$ install --globalskills.sh
Uso
Depois de instalar, você pode usar esta skill executando o seguinte comando no terminal:
skills use scrna-preprocessing-clustering