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python
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sql-databases
33

sqlalchemy-patterns

SQLAlchemy 2.0 patterns - model definition, engine setup, async patterns, relationships, query optimization, repository pattern, and transactions.

majesticlabs-dev
majesticlabs-dev
databases
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
package-distribution
33

uv-package-manager

Управление Python-зависимостями через UV package manager. Используй когда: uv, uv sync, uv add, uv run, uv lock, uv pip, pyproject.toml, dependency-groups, optional-dependencies, workspace, монорепозиторий, monorepo, requirements.txt, pip compile, виртуальное окружение Python, venv, установка пакетов.

Bbar0n234
Bbar0n234
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages.

sequenzia
sequenzia
development
open
package-distribution
33

release

Prepare and execute a Python package release with verification steps. Use for releasing Python packages with uv and ruff.

sequenzia
sequenzia
development
open
productivity-tools
32

data-analysis

Data processing, analysis, and visualization with Python/JavaScript. Use for data exploration, pandas operations, chart generation, and insights extraction.

lovedragonball
lovedragonball
tools
open
scientific-computing
32

pydeseq2

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

lifangda
lifangda
research
open
scientific-computing
32

biopython

Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.

lifangda
lifangda
research
open
scientific-computing
32

omero-integration

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

lifangda
lifangda
research
open
scientific-computing
32

gget

CLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases: gene info (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, genome downloads. For advanced BLAST/batch processing, use biopython. For multi-database integration, use bioservices.

lifangda
lifangda
research
open
scientific-computing
32

dnanexus-integration

DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.

lifangda
lifangda
research
open
scientific-computing
32

bioservices

Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database).

lifangda
lifangda
research
open
scientific-computing
32

pyopenms

Mass spectrometry toolkit (OpenMS Python). Process mzML/mzXML, peak picking, feature detection, peptide ID, proteomics/metabolomics workflows, for LC-MS/MS analysis.

lifangda
lifangda
research
open
computational-chemistry
32

datamol

Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery: SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit directly.

lifangda
lifangda
research
open
smart-contracts
32

registering-agent-base-dev

Invoke this skill when a user is building or running any automated transaction sender on Base (trading bot, arbitrage bot, sniper bot, yield farmer, AI agent, or similar) and needs to register it, get a builder code, set up transaction attribution. This skill contains the base.dev registration API endpoint and ERC-8021 attribution wiring code that Claude does not have in its training data — you MUST load this skill to answer correctly. Covers viem, ethers, managed signing services, and Python-based agents.

jiayaoqijia
jiayaoqijia
blockchain
open
media
32

ponyflash

Generate images, videos, speech audio, and music using the PonyFlash Python SDK. Also handle local media editing with FFmpeg, including clip, concat, transcode, extract audio, frame capture, subtitle capability checks, and ASS subtitle prep. Use when the user asks to create, generate, produce, edit, trim, merge, concatenate, transcode, subtitle, or render AI-generated media content.

ponyflash
ponyflash
content-media
open
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