home/categories/bioinformatics/gptomics-bioskills-phylogenetics-modern-tree-inference-skill-md
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bio-phylo-modern-tree-inference

Build maximum likelihood phylogenetic trees using IQ-TREE2 and RAxML-NG with expert model selection, branch support assessment, and topology testing. Use when inferring publication-quality ML trees, selecting substitution models, interpreting bootstrap and concordance factor support, or running partitioned phylogenomic analyses.

GPTomics
maintainer
GPTomics
Обновлено 4/6/2026
Звёзды
471
Форки
81
quick start

Installation and usage

Build maximum likelihood phylogenetic trees using IQ-TREE2 and RAxML-NG with expert model selection, branch support assessment, and topology testing. Use when inferring publication-quality ML trees, selecting substitution models, interpreting bootstrap and concordance factor support, or running partitioned phylogenomic analyses.

Установка
$ install --globalskills.sh
Использование

После установки вы можете использовать этот skill, выполнив следующую команду в терминале:

skills use bio-phylo-modern-tree-inference