home/categories/bioinformatics/gptomics-bioskills-phylogenetics-modern-tree-inference-skill-md
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bio-phylo-modern-tree-inference

Build maximum likelihood phylogenetic trees using IQ-TREE2 and RAxML-NG with expert model selection, branch support assessment, and topology testing. Use when inferring publication-quality ML trees, selecting substitution models, interpreting bootstrap and concordance factor support, or running partitioned phylogenomic analyses.

GPTomics
maintainer
GPTomics
Обновлено 06.04.2026
Звёзды
471
Форки
81
quick start

Installation and usage

Build maximum likelihood phylogenetic trees using IQ-TREE2 and RAxML-NG with expert model selection, branch support assessment, and topology testing. Use when inferring publication-quality ML trees, selecting substitution models, interpreting bootstrap and concordance factor support, or running partitioned phylogenomic analyses.

Установка
$ install --globalskills.sh
Использование

После установки вы можете использовать этот skill, выполнив следующую команду в терминале:

skills use bio-phylo-modern-tree-inference