home/categories/bioinformatics/gptomics-bioskills-rna-quantification-featurecounts-counting-skill-md
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bio-rna-quantification-featurecounts-counting

Count reads per gene from aligned BAM files using Subread featureCounts. Use when processing BAM files from STAR/HISAT2 to generate gene-level counts for DESeq2/edgeR.

GPTomics
maintainer
GPTomics
Обновлено 2/13/2026
Звёзды
471
Форки
81
quick start

Installation and usage

Count reads per gene from aligned BAM files using Subread featureCounts. Use when processing BAM files from STAR/HISAT2 to generate gene-level counts for DESeq2/edgeR.

Установка
$ install --globalskills.sh
Использование

После установки вы можете использовать этот skill, выполнив следующую команду в терминале:

skills use bio-rna-quantification-featurecounts-counting