bioinformaticsresearch
bio-spatial-transcriptomics-spatial-domains
Identify spatial domains and tissue regions in spatial transcriptomics data using Squidpy and Scanpy. Cluster spots considering both expression and spatial context to define anatomical regions. Use when identifying tissue domains or spatial regions.
maintainer
GPTomics
Обновлено 2/13/2026
Звёзды
471
Форки
81
quick start
Installation and usage
Identify spatial domains and tissue regions in spatial transcriptomics data using Squidpy and Scanpy. Cluster spots considering both expression and spatial context to define anatomical regions. Use when identifying tissue domains or spatial regions.
Установка
$ install --globalskills.sh
Использование
После установки вы можете использовать этот skill, выполнив следующую команду в терминале:
skills use bio-spatial-transcriptomics-spatial-domains