home/categories/bioinformatics/gptomics-bioskills-spatial-transcriptomics-spatial-neighbors-skill-md
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bio-spatial-transcriptomics-spatial-neighbors
Build spatial neighbor graphs for spatial transcriptomics data using Squidpy. Compute k-nearest neighbors, Delaunay triangulation, and radius-based connectivity for downstream spatial analyses. Use when building spatial neighborhood graphs.
maintainer
GPTomics
Обновлено 13.02.2026
Звёзды
471
Форки
81
quick start
Installation and usage
Build spatial neighbor graphs for spatial transcriptomics data using Squidpy. Compute k-nearest neighbors, Delaunay triangulation, and radius-based connectivity for downstream spatial analyses. Use when building spatial neighborhood graphs.
Установка
$ install --globalskills.sh
Использование
После установки вы можете использовать этот skill, выполнив следующую команду в терминале:
skills use bio-spatial-transcriptomics-spatial-neighbors