neuropixels-analysis
Pipeline for analyzing Neuropixels extracellular electrophysiology recordings. Covers probe geometry loading (ProbeInterface), spike sorting with Kilosort via SpikeInterface, quality metrics computation, unit curation (ISI violations, firing rate, signal-to-noise), and post-sort analysis (PSTH, tuning curves, population decoding) using pandas and matplotlib. Designed for acute and chronic Neuropixels 1.0/2.0/Ultra recordings from rodent and primate experiments.
Installation and usage
Pipeline for analyzing Neuropixels extracellular electrophysiology recordings. Covers probe geometry loading (ProbeInterface), spike sorting with Kilosort via SpikeInterface, quality metrics computation, unit curation (ISI violations, firing rate, signal-to-noise), and post-sort analysis (PSTH, tuning curves, population decoding) using pandas and matplotlib. Designed for acute and chronic Neuropixels 1.0/2.0/Ultra recordings from rodent and primate experiments.
После установки вы можете использовать этот skill, выполнив следующую команду в терминале:
skills use neuropixels-analysis