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pdb-database

Python API for RCSB PDB 3D structures (search, fetch coordinates, metadata). Input MUST be a protein/gene name (e.g. 'KRAS', 'EGFR', 'BTK') or a 4-character PDB ID (e.g. '6OIM'). Returns zero results for drug/chemistry phrases such as 'covalent inhibitors' or 'warhead selectivity'. Strip all drug qualifiers — pass only the target protein name or PDB accession.

lamm-mit
maintainer
lamm-mit
Обновлено 3/14/2026
Звёзды
156
Форки
35
quick start

Installation and usage

Python API for RCSB PDB 3D structures (search, fetch coordinates, metadata). Input MUST be a protein/gene name (e.g. 'KRAS', 'EGFR', 'BTK') or a 4-character PDB ID (e.g. '6OIM'). Returns zero results for drug/chemistry phrases such as 'covalent inhibitors' or 'warhead selectivity'. Strip all drug qualifiers — pass only the target protein name or PDB accession.

Установка
$ install --globalskills.sh
Использование

После установки вы можете использовать этот skill, выполнив следующую команду в терминале:

skills use pdb-database