home/categories/scientific-computing/pharmolix-openbiomed-skills-single-cell-foundation-model-scrna-seq-geneformer-skill-md
scientific-computingresearch
single-cell-foundation-model-geneformer
Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.
maintainer
PharMolix
Обновлено 3/16/2026
Звёзды
1036
Форки
120
quick start
Installation and usage
Use this skill when a task involves Geneformer workflows, especially TranscriptomeTokenizer input preparation, tokenized `.dataset` generation, cell or gene classification with `Classifier`, embedding extraction with `EmbExtractor`, and in silico perturbation analysis with `InSilicoPerturber`.
Установка
$ install --globalskills.sh
Использование
После установки вы можете использовать этот skill, выполнив следующую команду в терминале:
skills use single-cell-foundation-model-geneformer