data-engineeringdata-ai
spatial-raw-processing
Process barcoded spatial transcriptomics FASTQ pairs with st_pipeline, preserve upstream artifacts, convert the counts matrix into a standardized raw_counts.h5ad, and hand off cleanly to spatial-preprocess.
maintainer
TianGzlab
Обновлено 4/6/2026
Звёзды
115
Форки
23
quick start
Installation and usage
Process barcoded spatial transcriptomics FASTQ pairs with st_pipeline, preserve upstream artifacts, convert the counts matrix into a standardized raw_counts.h5ad, and hand off cleanly to spatial-preprocess.
Установка
$ install --globalskills.sh
Использование
После установки вы можете использовать этот skill, выполнив следующую команду в терминале:
skills use spatial-raw-processing