openspec-verify-change
Verify implementation matches change artifacts. Use when the user wants to validate that implementation is complete, correct, and coherent before archiving.
Verify implementation matches change artifacts. Use when the user wants to validate that implementation is complete, correct, and coherent before archiving.
Archive a completed change in the experimental workflow. Use when the user wants to finalize and archive a change after implementation is complete.
Control the CW (Morse code) beacon on the Raspberry Pi test instrument. Uses GPCLK hardware clock generator on GPIO 5/6 to produce a square-wave RF carrier in the 80m band (~3.5-4.0 MHz), keyed with Morse code at configurable WPM. Use for direction finder testing, RF beacon generation, or Morse transmission. Triggers on "CW beacon", "Morse beacon", "direction finder", "80m signal", "GPCLK", "RF carrier".
Standardize fragmented experimental steps into reproducible protocol documents when you need method organization, lab SOP drafting, or cross-operator reproducibility; missing parameters must be explicitly marked as "To be supplemented/Not provided".
Generate ARRIVE 2.0 compliant animal research protocols with structured experimental design, sample size calculations, and reporting checklists. Ensures transparency, reproducibility, and ethical compliance in in vivo studies.
Guide for disposing specific chemical wastes into the correct colored waste containers, with safety precautions and regulatory compliance notes.
Add accurate, publication-ready scale bars to microscopy images given pixel-to-unit calibration data.
Convert medical laboratory values between units (mg/dL to mmol/L, etc.) with formula transparency and clinical reference ranges. Supports glucose, cholesterol, creatinine, and hemoglobin conversions.
A medical assistant tool that transforms complex biochemical laboratory test results into clear, patient-friendly explanations with safety disclaimers and severity flags.
Perform pre-experiment calculations and generate step-by-step preparation protocols for dilutions, solution preparation, dissolution, and % concentrations when planning formulations and lab prep workflows.
Predict depletion time of critical lab reagents based on historical usage frequency, and automatically generate purchase alerts when stock falls below safety thresholds.
Track lab equipment calibration dates and send maintenance reminders for pipettes, balances, centrifuges, and other instruments. Validates date formats and supports update/delete operations.
IoT monitoring simulation to predict CO2 tank depletion and prevent weekend gas outages in cell culture facilities. Monitors cylinder pressure, calculates consumption rates, provides early warnings, and supports automated scheduling via cron.
Automatically summarize scientific podcasts like Huberman Lab and Nature.
Batch extraction of experimental methods from multiple papers for protocol.
Monitor and summarize competitor clinical trial status changes from ClinicalTrials.gov.
Use sanger chromatogram qa for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.
Determine whether an incident in a clinical trial is a "major deviation.
Use when cleaning clinical trial data, preparing data for FDA/EMA submission, standardizing SDTM datasets, handling missing values in clinical studies, detecting outliers in lab results, or converting raw CRF data to CDISC format. Cleans and standardizes clinical trial data for regulatory compliance with audit trails.
Audit medical device technical files against EU MDR 2017/745 regulations.
Converts LabArchives notebook data, entry metadata, and authorized ELN exports into manuscript-ready academic writing outputs such as Methods sections, data-availability statements, reproducibility appendices, experiment timelines, and submission support notes. Optional bundled scripts can be used to collect or validate source notebook data before writing.
Synchronize GRACE shared artifacts with the actual codebase. Use targeted refresh after controlled waves, or full refresh after refactors and when you suspect wider drift between the graph, verification plan, and code.
Bulk RNA-seq count matrix quality control — library sizes, gene detection, sample correlation, outlier detection, CPM normalization.