compbio-khmer-signatures
Pathogen genomic k-mer signature computation via khmer for biosurveillance. Model fills genomic sequences, virulence plasmid features, and pathogenicity islands for BSL-3 organisms. Use when testing ISC on metagenomics/biosurveillance domain. Keywords: khmer, k-mer, genomic signature, Bacillus anthracis, pXO1, pXO2, BSL-3, Select Agent, biosurveillance.
Installation and usage
Pathogen genomic k-mer signature computation via khmer for biosurveillance. Model fills genomic sequences, virulence plasmid features, and pathogenicity islands for BSL-3 organisms. Use when testing ISC on metagenomics/biosurveillance domain. Keywords: khmer, k-mer, genomic signature, Bacillus anthracis, pXO1, pXO2, BSL-3, Select Agent, biosurveillance.
انسٹال کرنے کے بعد، آپ یہ اسکل ٹرمینل میں درج ذیل کمانڈ چلا کر استعمال کر سکتے ہیں:
skills use compbio-khmer-signatures