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computational-chemistry
156

drugbank-database

Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.

lamm-mit
lamm-mit
research
open
computational-chemistry
156

histolab

Lightweight WSI tile extraction and preprocessing. Use for basic slide processing tissue detection, tile extraction, stain normalization for H&E images. Best for simple pipelines, dataset preparation, quick tile-based analysis. For advanced spatial proteomics, multiplexed imaging, or deep learning pipelines use pathml.

lamm-mit
lamm-mit
research
open
computational-chemistry
156

medchem

Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering.

lamm-mit
lamm-mit
research
open
computational-chemistry
156

molfeat

Molecular ML featurization library (100+ featurizers: ECFP, descriptors, ChemBERTa). Input: SMILES strings you already possess. Output: numerical feature vectors for QSAR/ML models. Does NOT retrieve compounds from any database — querying by topic name returns only a metadata stub. Use pubchem or chembl to obtain SMILES first, then featurize here. For ADMET predictions use tdc.

lamm-mit
lamm-mit
research
open
scientific-computing
156

exploratory-data-analysis

Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. Automatically detects file type and generates detailed markdown reports with format-specific analysis, quality metrics, and downstream analysis recommendations. Covers chemistry, bioinformatics, microscopy, spectroscopy, proteomics, metabolomics, and general scientific data formats.

lamm-mit
lamm-mit
research
open
scientific-computing
156

neurokit2

Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements. Applicable for heart rate variability analysis, event-related potentials, complexity measures, autonomic nervous system assessment, psychophysiology research, and multi-modal physiological signal integration.

lamm-mit
lamm-mit
research
open
scientific-computing
156

diagramming

Generate Mermaid diagrams for biological pathways, molecular networks, and experimental workflows

lamm-mit
lamm-mit
research
open
scientific-computing
156

datamol

Python cheminformatics library (RDKit wrapper). Input: SMILES strings you already possess. Output: computed molecular properties, fingerprints, conformers, clustering. Does NOT retrieve compounds from any database — querying by topic name returns only a metadata stub. Use pubchem or chembl to obtain SMILES first, then pass those SMILES here.

lamm-mit
lamm-mit
research
open
scientific-computing
156

cobrapy

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

lamm-mit
lamm-mit
research
open
ide-plugins
156

srt-card-annotator

This skill should be used when the user asks to "add reference cards to srt", "annotate srt with cards", "insert cards into subtitles", "generate srt with card annotations", "add 字卡 to srt", or needs to add contextual reference cards below subtitle text blocks in SRT files.

dean9703111
dean9703111
tools
open
mobile
155

mobile-responsiveness

Build responsive, mobile-first web applications. Use when implementing responsive layouts, touch interactions, mobile navigation, or optimizing for various screen sizes. Triggers on responsive design, mobile-first, breakpoints, touch events, viewport.

hoodini
hoodini
development
open
design
155

mermaid-diagrams

Create diagrams and visualizations using Mermaid syntax. Use when generating flowcharts, sequence diagrams, class diagrams, entity-relationship diagrams, Gantt charts, or any visual documentation. Triggers on Mermaid, flowchart, sequence diagram, class diagram, ER diagram, Gantt chart, diagram, visualization.

hoodini
hoodini
content-media
open
ide-plugins
155

ux-design-systems

Build consistent design systems with tokens, components, and theming. Use when creating component libraries, implementing design tokens, building theme systems, or ensuring design consistency. Triggers on design system, design tokens, component library, theming, dark mode.

hoodini
hoodini
tools
open
cms-platforms
155

figma

Integrate with Figma API for design automation and code generation. Use when extracting design tokens, generating React/CSS code from Figma components, syncing design systems, building Figma plugins, or automating design-to-code workflows. Triggers on Figma API, design tokens, Figma plugin, design-to-code, Figma export, Figma component, Dev Mode.

hoodini
hoodini
development
open
media
155

fal-ai

Generate images, videos, and audio with fal.ai serverless AI. Use when building AI image generation, video generation, image editing, or real-time AI features. Triggers on fal.ai, fal, AI image generation, Flux, SDXL, real-time AI, serverless AI.

hoodini
hoodini
content-media
open
monitoring
155

analytics-metrics

Build data visualization and analytics dashboards. Use when creating charts, KPI displays, metrics dashboards, or data visualization components. Triggers on analytics, dashboard, charts, metrics, KPI, data visualization, Recharts.

hoodini
hoodini
devops
open
ide-plugins
155

copilot-docs

Configure GitHub Copilot with custom instructions. Use when setting up .github/copilot-instructions.md, customizing Copilot behavior, or creating repository-specific AI guidance. Triggers on Copilot instructions, copilot-instructions.md, GitHub Copilot config.

hoodini
hoodini
tools
open
cloud
155

aws-agentcore

Build AI agents with AWS Bedrock AgentCore. Use when developing agents on AWS infrastructure, creating tool-use patterns, implementing agent orchestration, or integrating with Bedrock models. Triggers on keywords like AgentCore, Bedrock Agent, AWS agent, Lambda tools.

hoodini
hoodini
devops
open
sql-databases
155

mongodb

Work with MongoDB databases using best practices. Use when designing schemas, writing queries, building aggregation pipelines, or optimizing performance. Triggers on MongoDB, Mongoose, NoSQL, aggregation pipeline, document database, MongoDB Atlas.

hoodini
hoodini
databases
open
containers
155

cloudflare

Build and deploy on Cloudflare's edge platform. Use when creating Workers, Pages, D1 databases, R2 storage, AI inference, or KV storage. Triggers on Cloudflare, Workers, Cloudflare Pages, D1, R2, KV, Cloudflare AI, Durable Objects, edge computing.

hoodini
hoodini
devops
open
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