home/categories/scientific-computing/gptomics-bioskills-population-genetics-scikit-allel-analysis-skill-md
scientific-computingresearch

bio-population-genetics-scikit-allel-analysis

Python population genetics with scikit-allel. Read VCF files, compute allele frequencies, calculate diversity statistics, perform PCA, and run selection scans using GenotypeArray and HaplotypeArray data structures. Use when analyzing population genetics in Python.

GPTomics
maintainer
GPTomics
更新於 2/13/2026
星標
471
分支
81
quick start

Installation and usage

Python population genetics with scikit-allel. Read VCF files, compute allele frequencies, calculate diversity statistics, perform PCA, and run selection scans using GenotypeArray and HaplotypeArray data structures. Use when analyzing population genetics in Python.

安裝
$ install --globalskills.sh
使用

安裝後,您可以通過在終端運行以下命令來使用此技能:

skills use bio-population-genetics-scikit-allel-analysis