home/categories/bioinformatics/gptomics-bioskills-imaging-mass-cytometry-cell-segmentation-skill-md
bioinformaticsresearch

bio-imaging-mass-cytometry-cell-segmentation

Cell segmentation from multiplexed tissue images. Covers deep learning (Cellpose, Mesmer) and classical approaches for nuclear and whole-cell segmentation. Use when extracting single-cell data from IMC or MIBI images after preprocessing.

GPTomics
maintainer
GPTomics
更新於 2/13/2026
星標
471
分支
81
quick start

Installation and usage

Cell segmentation from multiplexed tissue images. Covers deep learning (Cellpose, Mesmer) and classical approaches for nuclear and whole-cell segmentation. Use when extracting single-cell data from IMC or MIBI images after preprocessing.

安裝
$ install --globalskills.sh
使用

安裝後,您可以透過在終端機執行以下指令來使用此技能:

skills use bio-imaging-mass-cytometry-cell-segmentation